🐞 Hunting Heisenbugs in Embedded Systems: A Deep Dive into the Invisible
Kalvin McCallum

Kalvin McCallum @kalvin_mccallum

About: Computer Engineer with a passion for embedded software tools.

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Joined:
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🐞 Hunting Heisenbugs in Embedded Systems: A Deep Dive into the Invisible

Publish Date: Jul 28
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"If it disappears when you look at it, it’s probably a Heisenbug."

Embedded systems are notorious for their complexity, tight resource constraints, and real-time requirements. But among all the challenges, few are as maddening as the Heisenbug—a bug that vanishes or changes behavior when you try to debug it.

In this post, we’ll explore:

  • What makes Heisenbugs so tricky in embedded environments
  • Real-world examples
  • Tools and techniques to catch them
  • A case study from a real firmware project

🧠 What Is a Heisenbug?

A Heisenbug is a software bug that seems to disappear or alter its behavior when you attempt to study it. In embedded systems, this often happens due to:

  • Timing sensitivity: Adding breakpoints or logging changes execution timing.
  • Memory corruption: Observing memory can inadvertently fix alignment or overwrite issues.
  • Interrupt interference: Debugging tools may disable interrupts, masking race conditions.

🔍 Real-World Example: UART Overrun That Disappeared

Imagine a microcontroller-based system where UART communication occasionally fails. You add logging to trace the issue—and suddenly, it works perfectly. Remove the logging, and the bug returns.

Root cause? The logging slowed down the main loop just enough to avoid a UART buffer overrun. Classic Heisenbug.


🛠️ Tools and Techniques to Catch Them

1. Trace-Based Debugging

Use tools like:

  • SEGGER J-Trace
  • ARM ITM/SWO
  • ETM (Embedded Trace Macrocell)

These allow non-intrusive logging of program execution and events.

2. Hardware Watchpoints

Set watchpoints on memory addresses to catch unexpected writes or reads.

3. Cycle-Accurate Simulators

Simulators like Renode or QEMU (with peripherals) can help reproduce timing-sensitive bugs.

4. Snapshot Debugging

Tools like Percepio Tracealyzer or Lauterbach Trace32 let you capture system state over time.

5. Redundant Logging

Use ring buffers in RAM to store logs and dump them only on crash or reboot.


🧪 Case Study: RTOS Task Starvation

In a recent project, a low-priority task was intermittently failing to run. Debugging with breakpoints showed no issue. The culprit? A high-priority task was hogging the CPU due to a missed semaphore release.

Fix: Added a watchdog timer and used Tracealyzer to visualize task execution. The starvation became obvious.


🧭 Final Thoughts

Heisenbugs are a rite of passage for embedded developers. They test your patience, your tools, and your understanding of the system. But with the right approach, you can turn even the most elusive bug into a solved mystery.


Have you faced a Heisenbug in your embedded work? Share your story in the comments!

Comments 2 total

  • Paul J. Lucas
    Paul J. LucasJul 28, 2025

    I know Heisenbug is the common term for this kind of bug, but it's unfortunate nevertheless. In physics, the Heisenberg Uncertainty Principle is that you can't know two properties of a particle, say its position and momentum, at the same time.

    An analog of that for debugging software might be that you couldn't know the bug's location (file and line number) and (assuming the bug in question involves an ordinary variable, say a pointer) the pointer's value at that line number at the same time.

    The phenomenon in debugging software where trying to debug something changes the system just enough so as to cause the bug not to manifest is instead an analog of the Observer Effect.

    • Kalvin McCallum
      Kalvin McCallumJul 29, 2025

      You're absolutely right to point out the distinction between the Heisenberg Uncertainty Principle and the Observer Effect - and it's a great clarification.

      The term Heisenbug is definitely more metaphorical than literal. While the Uncertainty Principle deals with the fundamental limits of measurement in quantum mechanics (like not being able to know both position and momentum precisely), the debugging phenomenon we’re talking about is indeed closer to the Observer Effect - where the act of observing a system changes its behavior.

      That said, the term Heisenbug has stuck in software folklore, probably because it captures the vibe of the problem: the more you try to pin it down, the more elusive it becomes. But your analogy - about not being able to know both the bug's location and the variable's value at the same time - is a clever and fitting twist!

      Thanks for the insightful comment - this kind of nuance is what makes these discussions so valuable.

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